Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.73■□□□□ 0.11
CTSDP07339 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.73■□□□□ 0.11
CTSDP07339 AC022517.1-201ENST00000592429 346 ntBASIC15.73■□□□□ 0.11
CTSDP07339 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CTSDP07339 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.72■□□□□ 0.11
CTSDP07339 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 HTR7P1-202ENST00000624664 4411 ntBASIC15.72■□□□□ 0.11
CTSDP07339 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.72■□□□□ 0.11
CTSDP07339 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
CTSDP07339 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.72■□□□□ 0.11
CTSDP07339 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 AC005181.1-201ENST00000604782 1256 ntBASIC15.72■□□□□ 0.11
CTSDP07339 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.72■□□□□ 0.11
CTSDP07339 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CTSDP07339 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.72■□□□□ 0.11
CTSDP07339 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.72■□□□□ 0.11
CTSDP07339 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTSDP07339 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CTSDP07339 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CTSDP07339 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSDP07339 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSDP07339 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSDP07339 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.71■□□□□ 0.11
CTSDP07339 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 RAP2CP1-201ENST00000605103 478 ntBASIC15.71■□□□□ 0.11
CTSDP07339 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.71■□□□□ 0.11
CTSDP07339 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.71■□□□□ 0.11
CTSDP07339 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.71■□□□□ 0.11
CTSDP07339 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CTSDP07339 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTSDP07339 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms