Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KRT6AP02538 AL512353.2-201ENST00000448759 1962 ntBASIC18.35■□□□□ 0.53
KRT6AP02538 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT6AP02538 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 AC124016.1-201ENST00000609552 612 ntBASIC18.34■□□□□ 0.53
KRT6AP02538 AC110285.5-201ENST00000611501 352 ntBASIC18.34■□□□□ 0.53
KRT6AP02538 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT6AP02538 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT6AP02538 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT6AP02538 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT6AP02538 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6AP02538 KRT8P41-201ENST00000533985 1514 ntBASIC18.33■□□□□ 0.53
KRT6AP02538 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6AP02538 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
KRT6AP02538 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6AP02538 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
KRT6AP02538 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
KRT6AP02538 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6AP02538 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT6AP02538 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KRT6AP02538 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6AP02538 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT6AP02538 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT6AP02538 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT6AP02538 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT6AP02538 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
KRT6AP02538 RN7SL471P-201ENST00000580476 299 ntBASIC18.33■□□□□ 0.52
KRT6AP02538 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT6AP02538 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6AP02538 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6AP02538 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6AP02538 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6AP02538 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6AP02538 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KRT6AP02538 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT6AP02538 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KRT6AP02538 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT6AP02538 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT6AP02538 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
KRT6AP02538 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.32■□□□□ 0.52
KRT6AP02538 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT6AP02538 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT6AP02538 AL445675.2-201ENST00000620291 557 ntBASIC18.32■□□□□ 0.52
KRT6AP02538 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT6AP02538 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KRT6AP02538 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT6AP02538 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KRT6AP02538 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT6AP02538 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
KRT6AP02538 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
KRT6AP02538 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT6AP02538 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KRT6AP02538 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms