Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TOP3BO95985 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TOP3BO95985 KRT18P48-201ENST00000434763 852 ntBASIC19.38■□□□□ 0.69
TOP3BO95985 ATP5G1P1-201ENST00000448724 379 ntBASIC19.38■□□□□ 0.69
TOP3BO95985 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.38■□□□□ 0.69
TOP3BO95985 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.38■□□□□ 0.69
TOP3BO95985 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.38■□□□□ 0.69
TOP3BO95985 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.38■□□□□ 0.69
TOP3BO95985 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TOP3BO95985 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.38■□□□□ 0.69
TOP3BO95985 AC116351.2-201ENST00000606540 1585 ntBASIC19.38■□□□□ 0.69
TOP3BO95985 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
TOP3BO95985 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.38■□□□□ 0.69
TOP3BO95985 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
TOP3BO95985 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
TOP3BO95985 AC104581.1-202ENST00000635932 2618 ntBASIC19.38■□□□□ 0.69
TOP3BO95985 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP3BO95985 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP3BO95985 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.38■□□□□ 0.69
TOP3BO95985 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP3BO95985 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP3BO95985 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP3BO95985 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.37■□□□□ 0.69
TOP3BO95985 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP3BO95985 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP3BO95985 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
TOP3BO95985 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.37■□□□□ 0.69
TOP3BO95985 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.37■□□□□ 0.69
TOP3BO95985 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.37■□□□□ 0.69
TOP3BO95985 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.37■□□□□ 0.69
TOP3BO95985 CR392000.1-201ENST00000624770 1228 ntBASIC19.37■□□□□ 0.69
TOP3BO95985 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.37■□□□□ 0.69
TOP3BO95985 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.37■□□□□ 0.69
TOP3BO95985 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.37■□□□□ 0.69
TOP3BO95985 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.37■□□□□ 0.69
TOP3BO95985 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP3BO95985 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.37■□□□□ 0.69
TOP3BO95985 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP3BO95985 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP3BO95985 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP3BO95985 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TOP3BO95985 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.36■□□□□ 0.69
TOP3BO95985 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TOP3BO95985 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 AK4P3-201ENST00000418260 669 ntBASIC19.36■□□□□ 0.69
TOP3BO95985 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 ECEL1P2-202ENST00000465689 757 ntBASIC19.36■□□□□ 0.69
TOP3BO95985 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 AC116562.2-201ENST00000507042 360 ntBASIC19.36■□□□□ 0.69
TOP3BO95985 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.36■□□□□ 0.69
TOP3BO95985 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.36■□□□□ 0.69
TOP3BO95985 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP3BO95985 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP3BO95985 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.35■□□□□ 0.69
TOP3BO95985 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TOP3BO95985 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TOP3BO95985 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TOP3BO95985 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 DUSP5P1-201ENST00000441325 1139 ntBASIC19.35■□□□□ 0.69
TOP3BO95985 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.35■□□□□ 0.69
TOP3BO95985 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.35■□□□□ 0.69
TOP3BO95985 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.35■□□□□ 0.69
TOP3BO95985 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.35■□□□□ 0.69
TOP3BO95985 AC022616.7-201ENST00000525383 220 ntBASIC19.35■□□□□ 0.69
TOP3BO95985 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.35■□□□□ 0.69
TOP3BO95985 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.35■□□□□ 0.69
TOP3BO95985 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms