Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SCN2BO60939 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN2BO60939 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.97■□□□□ 0.47
SCN2BO60939 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
SCN2BO60939 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.96■□□□□ 0.47
SCN2BO60939 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.96■□□□□ 0.47
SCN2BO60939 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SCN2BO60939 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SCN2BO60939 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 KRT17P3-201ENST00000420566 1262 ntBASIC17.96■□□□□ 0.47
SCN2BO60939 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN2BO60939 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SCN2BO60939 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SCN2BO60939 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.96■□□□□ 0.47
SCN2BO60939 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN2BO60939 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN2BO60939 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN2BO60939 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN2BO60939 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SCN2BO60939 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN2BO60939 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN2BO60939 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 ID1-201ENST00000376105 1233 ntBASIC17.95■□□□□ 0.46
SCN2BO60939 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 Z85996.1-201ENST00000494644 937 ntBASIC17.95■□□□□ 0.46
SCN2BO60939 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.95■□□□□ 0.46
SCN2BO60939 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN2BO60939 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 AC007613.1-201ENST00000572811 2597 ntBASIC17.95■□□□□ 0.46
SCN2BO60939 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN2BO60939 BICD1-207ENST00000551848 1962 ntBASIC17.95■□□□□ 0.46
SCN2BO60939 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN2BO60939 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SCN2BO60939 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN2BO60939 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 POU5F1P3-201ENST00000428824 1078 ntBASIC17.94■□□□□ 0.46
SCN2BO60939 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 RNA5SP413-201ENST00000516373 109 ntBASIC17.94■□□□□ 0.46
SCN2BO60939 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.94■□□□□ 0.46
SCN2BO60939 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.94■□□□□ 0.46
SCN2BO60939 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN2BO60939 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN2BO60939 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN2BO60939 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms