Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.25■□□□□ 0.99
ACTN4O43707 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.25■□□□□ 0.99
ACTN4O43707 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.25■□□□□ 0.99
ACTN4O43707 AC091390.4-202ENST00000476426 537 ntBASIC21.25■□□□□ 0.99
ACTN4O43707 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
ACTN4O43707 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.25■□□□□ 0.99
ACTN4O43707 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.25■□□□□ 0.99
ACTN4O43707 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.25■□□□□ 0.99
ACTN4O43707 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.25■□□□□ 0.99
ACTN4O43707 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
ACTN4O43707 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
ACTN4O43707 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.24■□□□□ 0.99
ACTN4O43707 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ACTN4O43707 KSR1P1-201ENST00000446298 240 ntBASIC21.24■□□□□ 0.99
ACTN4O43707 RPPH1-201ENST00000516869 333 ntBASIC21.24■□□□□ 0.99
ACTN4O43707 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.24■□□□□ 0.99
ACTN4O43707 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.24■□□□□ 0.99
ACTN4O43707 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.24■□□□□ 0.99
ACTN4O43707 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.24■□□□□ 0.99
ACTN4O43707 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ACTN4O43707 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ACTN4O43707 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ACTN4O43707 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 HEIH-201ENST00000623091 1652 ntBASIC21.24■□□□□ 0.99
ACTN4O43707 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ACTN4O43707 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ACTN4O43707 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.23■□□□□ 0.99
ACTN4O43707 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ACTN4O43707 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
ACTN4O43707 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 AP002982.1-201ENST00000492365 877 ntBASIC21.23■□□□□ 0.99
ACTN4O43707 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.23■□□□□ 0.99
ACTN4O43707 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.23■□□□□ 0.99
ACTN4O43707 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.23■□□□□ 0.99
ACTN4O43707 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
ACTN4O43707 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ACTN4O43707 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ACTN4O43707 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
ACTN4O43707 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.22■□□□□ 0.99
ACTN4O43707 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.22■□□□□ 0.99
ACTN4O43707 AC008040.2-201ENST00000461049 708 ntBASIC21.22■□□□□ 0.99
ACTN4O43707 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.22■□□□□ 0.99
ACTN4O43707 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.22■□□□□ 0.99
ACTN4O43707 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 MTMR9LP-203ENST00000426597 1545 ntBASIC21.22■□□□□ 0.99
ACTN4O43707 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.22■□□□□ 0.99
ACTN4O43707 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.22■□□□□ 0.99
ACTN4O43707 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACTN4O43707 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.22■□□□□ 0.99
ACTN4O43707 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ACTN4O43707 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ACTN4O43707 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACTN4O43707 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ACTN4O43707 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.21■□□□□ 0.99
ACTN4O43707 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACTN4O43707 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACTN4O43707 PRSS44-201ENST00000515154 1146 ntBASIC21.21■□□□□ 0.99
ACTN4O43707 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.21■□□□□ 0.99
ACTN4O43707 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ACTN4O43707 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms