Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ATP2A1O14983 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.68■■□□□ 1.06
ATP2A1O14983 Z82202.1-201ENST00000623446 1880 ntBASIC21.68■■□□□ 1.06
ATP2A1O14983 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP2A1O14983 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP2A1O14983 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.67■■□□□ 1.06
ATP2A1O14983 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP2A1O14983 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP2A1O14983 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP2A1O14983 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
ATP2A1O14983 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ATP2A1O14983 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP2A1O14983 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.67■■□□□ 1.06
ATP2A1O14983 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.67■■□□□ 1.06
ATP2A1O14983 AC069148.1-201ENST00000608741 768 ntBASIC21.67■■□□□ 1.06
ATP2A1O14983 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A1O14983 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A1O14983 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ATP2A1O14983 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A1O14983 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A1O14983 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A1O14983 AC125437.2-201ENST00000625180 2167 ntBASIC21.66■■□□□ 1.06
ATP2A1O14983 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.66■■□□□ 1.06
ATP2A1O14983 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP2A1O14983 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A1O14983 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A1O14983 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2A1O14983 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2A1O14983 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.65■■□□□ 1.06
ATP2A1O14983 SEC1P-202ENST00000473944 940 ntBASIC21.65■■□□□ 1.06
ATP2A1O14983 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP2A1O14983 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2A1O14983 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
ATP2A1O14983 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP2A1O14983 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
ATP2A1O14983 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2A1O14983 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ATP2A1O14983 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ATP2A1O14983 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A1O14983 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.64■■□□□ 1.06
ATP2A1O14983 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2A1O14983 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2A1O14983 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2A1O14983 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2A1O14983 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.64■■□□□ 1.06
ATP2A1O14983 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
ATP2A1O14983 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2A1O14983 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
ATP2A1O14983 AL109659.2-201ENST00000606809 1674 ntBASIC21.64■■□□□ 1.05
ATP2A1O14983 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A1O14983 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A1O14983 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.64■■□□□ 1.05
ATP2A1O14983 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2A1O14983 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.64■■□□□ 1.05
ATP2A1O14983 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2A1O14983 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
ATP2A1O14983 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A1O14983 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
ATP2A1O14983 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms