Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AC012618.2-201ENST00000428058 849 ntBASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AC130371.2-201ENST00000619443 611 ntBASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AL049637.2-201ENST00000641778 930 ntBASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM6-TRIM34B2RNG4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 FAM207BP-201ENST00000447172 505 ntBASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AP001412.1-201ENST00000608405 714 ntBASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM6-TRIM34B2RNG4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 FSCN1P1-201ENST00000568912 1481 ntBASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 MESTP1-201ENST00000404287 994 ntBASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM6-TRIM34B2RNG4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 AC008550.1-201ENST00000511500 884 ntBASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 PRSS44-201ENST00000515154 1146 ntBASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM6-TRIM34B2RNG4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM6-TRIM34B2RNG4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms