Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 KRT18P61-201ENST00000585825 1298 ntBASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 NOC2LP2-201ENST00000407594 1944 ntBASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV34A0A0B4J273 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 AL162412.1-201ENST00000567129 965 ntBASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 AL139246.5-201ENST00000606645 996 ntBASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV34A0A0B4J273 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.65□□□□□ -0.07
TRAV34A0A0B4J273 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 IRX1P1-201ENST00000438849 1838 ntBASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 RARRES2P4-201ENST00000514074 484 ntBASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 AC100791.3-201ENST00000617619 330 ntBASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV34A0A0B4J273 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV34A0A0B4J273 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms