Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 KRT18P20-201ENST00000548986 1279 ntBASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 AC068587.6-202ENST00000641839 5619 ntBASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV13-2A0A0B4J235 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 LINC00896-202ENST00000609602 2128 ntBASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 AC083906.6-201ENST00000641366 219 ntBASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
TRAV13-2A0A0B4J235 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms