Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.22■□□□□ 0.51
LIN28AQ9H9Z2 LINC01465-201ENST00000408887 1940 ntBASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 KRT16P5-201ENST00000455284 522 ntBASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 CROCCP3-202ENST00000420820 1947 ntBASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 HTR7P1-201ENST00000538670 1336 ntBASIC18.21■□□□□ 0.51
LIN28AQ9H9Z2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 RPS2P55-201ENST00000397318 883 ntBASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 AC107956.1-201ENST00000494359 873 ntBASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 AC004264.1-201ENST00000608354 794 ntBASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LIN28AQ9H9Z2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN28AQ9H9Z2 AC099398.1-201ENST00000567919 2776 ntBASIC18.19■□□□□ 0.5
LIN28AQ9H9Z2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN28AQ9H9Z2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN28AQ9H9Z2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN28AQ9H9Z2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms