Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.26■□□□□ 0.83
RAD9AQ99638 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD9AQ99638 AC090616.6-201ENST00000582640 721 ntBASIC20.26■□□□□ 0.83
RAD9AQ99638 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.26■□□□□ 0.83
RAD9AQ99638 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD9AQ99638 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD9AQ99638 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD9AQ99638 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 KRT8P3-201ENST00000519669 1449 ntBASIC20.26■□□□□ 0.83
RAD9AQ99638 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD9AQ99638 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD9AQ99638 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD9AQ99638 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD9AQ99638 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD9AQ99638 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RAD9AQ99638 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RAD9AQ99638 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD9AQ99638 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.25■□□□□ 0.83
RAD9AQ99638 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD9AQ99638 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RAD9AQ99638 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD9AQ99638 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
RAD9AQ99638 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD9AQ99638 AL121912.1-201ENST00000603683 238 ntBASIC20.25■□□□□ 0.83
RAD9AQ99638 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.25■□□□□ 0.83
RAD9AQ99638 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.25■□□□□ 0.83
RAD9AQ99638 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD9AQ99638 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD9AQ99638 AL512408.1-201ENST00000569378 2000 ntBASIC20.25■□□□□ 0.83
RAD9AQ99638 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD9AQ99638 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD9AQ99638 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
RAD9AQ99638 Z83836.1-201ENST00000624605 1642 ntBASIC20.24■□□□□ 0.83
RAD9AQ99638 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.24■□□□□ 0.83
RAD9AQ99638 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 AP000593.1-201ENST00000393668 712 ntBASIC20.24■□□□□ 0.83
RAD9AQ99638 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RAD9AQ99638 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RAD9AQ99638 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAD9AQ99638 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.23■□□□□ 0.83
RAD9AQ99638 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.23■□□□□ 0.83
RAD9AQ99638 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.23■□□□□ 0.83
RAD9AQ99638 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.23■□□□□ 0.83
RAD9AQ99638 SDHAP1-207ENST00000440850 2000 ntBASIC20.23■□□□□ 0.83
RAD9AQ99638 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.23■□□□□ 0.83
RAD9AQ99638 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.23■□□□□ 0.83
RAD9AQ99638 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.23■□□□□ 0.83
RAD9AQ99638 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RAD9AQ99638 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAD9AQ99638 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.23■□□□□ 0.83
RAD9AQ99638 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.23■□□□□ 0.83
RAD9AQ99638 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.23■□□□□ 0.83
RAD9AQ99638 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.23■□□□□ 0.83
RAD9AQ99638 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.23■□□□□ 0.83
RAD9AQ99638 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAD9AQ99638 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.23■□□□□ 0.83
RAD9AQ99638 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAD9AQ99638 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAD9AQ99638 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAD9AQ99638 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAD9AQ99638 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.22■□□□□ 0.83
RAD9AQ99638 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.22■□□□□ 0.83
RAD9AQ99638 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAD9AQ99638 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms