Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 YBX1P1-201ENST00000445822 960 ntBASIC14.32□□□□□ -0.12
AP1S3Q96PC3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 AL591742.1-201ENST00000604433 565 ntBASIC14.32□□□□□ -0.12
AP1S3Q96PC3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 AC004854.2-201ENST00000608450 1441 ntBASIC14.32□□□□□ -0.12
AP1S3Q96PC3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S3Q96PC3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 PTBP1P-201ENST00000554374 1601 ntBASIC14.31□□□□□ -0.12
AP1S3Q96PC3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP1S3Q96PC3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 HLA-G-202ENST00000376815 851 ntBASIC14.3□□□□□ -0.12
AP1S3Q96PC3 HLA-G-203ENST00000376818 1127 ntBASIC14.3□□□□□ -0.12
AP1S3Q96PC3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 UBE2DNL-204ENST00000602536 740 ntBASIC14.3□□□□□ -0.12
AP1S3Q96PC3 MYCNOS-205ENST00000641950 531 ntBASIC14.3□□□□□ -0.12
AP1S3Q96PC3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms