Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 AC007322.1-201ENST00000426983 750 ntBASIC18.41■□□□□ 0.54
HIPK4Q8NE63 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 OR10C1-204ENST00000622521 1039 ntBASIC18.41■□□□□ 0.54
HIPK4Q8NE63 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 AC093525.10-201ENST00000625130 1569 ntBASIC18.41■□□□□ 0.54
HIPK4Q8NE63 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HIPK4Q8NE63 AC010980.2-201ENST00000587099 1412 ntBASIC18.4■□□□□ 0.54
HIPK4Q8NE63 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.4■□□□□ 0.54
HIPK4Q8NE63 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.39■□□□□ 0.54
HIPK4Q8NE63 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HIPK4Q8NE63 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HIPK4Q8NE63 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HIPK4Q8NE63 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.39■□□□□ 0.53
HIPK4Q8NE63 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms