Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 AL049812.1-201ENST00000432563 2267 ntBASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAM1L1Q8N609 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AL512353.2-201ENST00000448759 1962 ntBASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 SLC25A3P1-201ENST00000443844 931 ntBASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AC005363.2-201ENST00000618631 242 ntBASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAM1L1Q8N609 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 MIR4674-201ENST00000582457 87 ntBASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAM1L1Q8N609 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 KRT8P32-201ENST00000512863 1461 ntBASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 GPAT2P1-201ENST00000444924 1672 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms