Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.23□□□□□ -0.77
LCA10Q71F78 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LCA10Q71F78 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
LCA10Q71F78 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC10.23□□□□□ -0.77
LCA10Q71F78 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LCA10Q71F78 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LCA10Q71F78 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 AC005224.4-201ENST00000583262 1652 ntBASIC10.23□□□□□ -0.77
LCA10Q71F78 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 AC007326.2-201ENST00000624224 7579 ntBASIC10.23□□□□□ -0.77
LCA10Q71F78 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC10.23□□□□□ -0.77
LCA10Q71F78 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC10.23□□□□□ -0.77
LCA10Q71F78 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC10.23□□□□□ -0.77
LCA10Q71F78 AC105233.4-201ENST00000642045 216 ntBASIC10.23□□□□□ -0.77
LCA10Q71F78 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 NF2-208ENST00000403435 2568 ntTSL 5 BASIC10.23□□□□□ -0.77
LCA10Q71F78 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC10.23□□□□□ -0.77
LCA10Q71F78 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC10.23□□□□□ -0.77
LCA10Q71F78 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 CROCCP3-202ENST00000420820 1947 ntBASIC10.23□□□□□ -0.77
LCA10Q71F78 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
LCA10Q71F78 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.23□□□□□ -0.77
LCA10Q71F78 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LCA10Q71F78 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LCA10Q71F78 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.23□□□□□ -0.77
LCA10Q71F78 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 CD276-203ENST00000537340 2439 ntTSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 LHPP-203ENST00000392757 840 ntTSL 3 BASIC10.22□□□□□ -0.77
LCA10Q71F78 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC10.22□□□□□ -0.77
LCA10Q71F78 AC024257.2-201ENST00000549699 147 ntBASIC10.22□□□□□ -0.77
LCA10Q71F78 AL136162.1-201ENST00000607711 1078 ntBASIC10.22□□□□□ -0.77
LCA10Q71F78 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC10.22□□□□□ -0.77
LCA10Q71F78 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 AC090164.3-201ENST00000610780 2143 ntBASIC10.22□□□□□ -0.77
LCA10Q71F78 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 BX005040.4-201ENST00000637145 1518 ntBASIC10.22□□□□□ -0.77
LCA10Q71F78 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LCA10Q71F78 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC10.22□□□□□ -0.77
LCA10Q71F78 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LCA10Q71F78 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms