Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 NIFKP9-201ENST00000419265 221 ntBASIC19.69■□□□□ 0.74
IRX4P78413 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
IRX4P78413 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.69■□□□□ 0.74
IRX4P78413 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
IRX4P78413 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX4P78413 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
IRX4P78413 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX4P78413 PTBP1P-201ENST00000554374 1601 ntBASIC19.69■□□□□ 0.74
IRX4P78413 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX4P78413 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX4P78413 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX4P78413 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX4P78413 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
IRX4P78413 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX4P78413 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX4P78413 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX4P78413 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
IRX4P78413 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
IRX4P78413 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX4P78413 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX4P78413 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
IRX4P78413 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
IRX4P78413 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
IRX4P78413 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX4P78413 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.67■□□□□ 0.74
IRX4P78413 LIN28AP1-201ENST00000429574 405 ntBASIC19.67■□□□□ 0.74
IRX4P78413 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.67■□□□□ 0.74
IRX4P78413 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.67■□□□□ 0.74
IRX4P78413 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.67■□□□□ 0.74
IRX4P78413 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.67■□□□□ 0.74
IRX4P78413 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX4P78413 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX4P78413 Z82202.1-201ENST00000623446 1880 ntBASIC19.67■□□□□ 0.74
IRX4P78413 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
IRX4P78413 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.66■□□□□ 0.74
IRX4P78413 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 KRT8P17-201ENST00000453110 1448 ntBASIC19.66■□□□□ 0.74
IRX4P78413 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IRX4P78413 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
IRX4P78413 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
IRX4P78413 AC009237.14-201ENST00000609975 1594 ntBASIC19.66■□□□□ 0.74
IRX4P78413 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
IRX4P78413 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX4P78413 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX4P78413 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms