Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SNRPFP62306 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.63■□□□□ 0.89
SNRPFP62306 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.63■□□□□ 0.89
SNRPFP62306 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.63■□□□□ 0.89
SNRPFP62306 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SNRPFP62306 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SNRPFP62306 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPFP62306 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.62■□□□□ 0.89
SNRPFP62306 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.62■□□□□ 0.89
SNRPFP62306 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.62■□□□□ 0.89
SNRPFP62306 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPFP62306 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.62■□□□□ 0.89
SNRPFP62306 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPFP62306 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.62■□□□□ 0.89
SNRPFP62306 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SNRPFP62306 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPFP62306 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.62■□□□□ 0.89
SNRPFP62306 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.62■□□□□ 0.89
SNRPFP62306 C2orf69P3-201ENST00000565542 1120 ntBASIC20.62■□□□□ 0.89
SNRPFP62306 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPFP62306 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPFP62306 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.62■□□□□ 0.89
SNRPFP62306 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.62■□□□□ 0.89
SNRPFP62306 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SNRPFP62306 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPFP62306 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SNRPFP62306 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SNRPFP62306 Z98044.1-201ENST00000632503 1764 ntBASIC20.62■□□□□ 0.89
SNRPFP62306 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 AL109659.2-201ENST00000606809 1674 ntBASIC20.61■□□□□ 0.89
SNRPFP62306 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.61■□□□□ 0.89
SNRPFP62306 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SNRPFP62306 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.61■□□□□ 0.89
SNRPFP62306 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 MIR1238-201ENST00000408483 83 ntBASIC20.61■□□□□ 0.89
SNRPFP62306 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.61■□□□□ 0.89
SNRPFP62306 CCR12P-201ENST00000446203 998 ntBASIC20.61■□□□□ 0.89
SNRPFP62306 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.61■□□□□ 0.89
SNRPFP62306 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SNRPFP62306 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.61■□□□□ 0.89
SNRPFP62306 AL353719.1-201ENST00000566847 864 ntBASIC20.61■□□□□ 0.89
SNRPFP62306 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SNRPFP62306 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SNRPFP62306 AL031598.1-201ENST00000561511 1773 ntBASIC20.61■□□□□ 0.89
SNRPFP62306 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.61■□□□□ 0.89
SNRPFP62306 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPFP62306 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPFP62306 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPFP62306 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPFP62306 MMP23A-201ENST00000234610 1017 ntBASIC20.6■□□□□ 0.89
SNRPFP62306 TSPY14P-201ENST00000303979 915 ntBASIC20.6■□□□□ 0.89
SNRPFP62306 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SNRPFP62306 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.6■□□□□ 0.89
SNRPFP62306 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPFP62306 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPFP62306 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPFP62306 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPFP62306 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.6■□□□□ 0.89
SNRPFP62306 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNRPFP62306 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRPFP62306 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SNRPFP62306 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SNRPFP62306 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.59■□□□□ 0.89
SNRPFP62306 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SNRPFP62306 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.59■□□□□ 0.89
SNRPFP62306 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.59■□□□□ 0.89
SNRPFP62306 EGLN1P1-201ENST00000531623 762 ntBASIC20.59■□□□□ 0.89
SNRPFP62306 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNRPFP62306 AC008622.2-201ENST00000617006 1229 ntBASIC20.59■□□□□ 0.89
SNRPFP62306 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SNRPFP62306 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRPFP62306 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRPFP62306 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.59■□□□□ 0.89
SNRPFP62306 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.59■□□□□ 0.89
SNRPFP62306 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.59■□□□□ 0.89
SNRPFP62306 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SNRPFP62306 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRPFP62306 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.58■□□□□ 0.89
SNRPFP62306 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms