Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.75■□□□□ 0.43
RPS3AP61247 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS3AP61247 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RPS3AP61247 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS3AP61247 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.75■□□□□ 0.43
RPS3AP61247 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.75■□□□□ 0.43
RPS3AP61247 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.75■□□□□ 0.43
RPS3AP61247 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 AC066615.1-201ENST00000640911 628 ntBASIC17.75■□□□□ 0.43
RPS3AP61247 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS3AP61247 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RPS3AP61247 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.75■□□□□ 0.43
RPS3AP61247 AC104581.1-202ENST00000635932 2618 ntBASIC17.75■□□□□ 0.43
RPS3AP61247 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS3AP61247 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS3AP61247 AC135050.7-201ENST00000624508 2218 ntBASIC17.75■□□□□ 0.43
RPS3AP61247 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RPS3AP61247 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RPS3AP61247 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS3AP61247 AC116351.2-201ENST00000606540 1585 ntBASIC17.74■□□□□ 0.43
RPS3AP61247 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RPS3AP61247 PRORSD1P-202ENST00000563365 2154 ntBASIC17.74■□□□□ 0.43
RPS3AP61247 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
RPS3AP61247 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS3AP61247 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.74■□□□□ 0.43
RPS3AP61247 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RPS3AP61247 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS3AP61247 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 MIR718-201ENST00000390190 70 ntBASIC17.74■□□□□ 0.43
RPS3AP61247 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS3AP61247 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.74■□□□□ 0.43
RPS3AP61247 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RPS3AP61247 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS3AP61247 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS3AP61247 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS3AP61247 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
RPS3AP61247 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RPS3AP61247 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS3AP61247 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPS3AP61247 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
RPS3AP61247 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS3AP61247 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS3AP61247 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RPS3AP61247 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS3AP61247 AP006587.1-201ENST00000534129 1502 ntBASIC17.73■□□□□ 0.43
RPS3AP61247 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.73■□□□□ 0.43
RPS3AP61247 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS3AP61247 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RPS3AP61247 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS3AP61247 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS3AP61247 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS3AP61247 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RPS3AP61247 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 AC018553.1-201ENST00000616682 1458 ntBASIC17.73■□□□□ 0.43
RPS3AP61247 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS3AP61247 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS3AP61247 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS3AP61247 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RPS3AP61247 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
RPS3AP61247 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RPS3AP61247 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RPS3AP61247 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPS3AP61247 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms