Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HMGA2P52926 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGA2P52926 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMGA2P52926 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.36
HMGA2P52926 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HMGA2P52926 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGA2P52926 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HMGA2P52926 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HMGA2P52926 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGA2P52926 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.32■□□□□ 0.36
HMGA2P52926 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.32■□□□□ 0.36
HMGA2P52926 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGA2P52926 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGA2P52926 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGA2P52926 TSPY6P-201ENST00000448518 926 ntBASIC17.32■□□□□ 0.36
HMGA2P52926 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGA2P52926 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGA2P52926 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGA2P52926 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGA2P52926 IKBKGP1-201ENST00000612193 1073 ntBASIC17.32■□□□□ 0.36
HMGA2P52926 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGA2P52926 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HMGA2P52926 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGA2P52926 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGA2P52926 KRT8P41-201ENST00000533985 1514 ntBASIC17.31■□□□□ 0.36
HMGA2P52926 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGA2P52926 AC020916.1-201ENST00000587762 1774 ntBASIC17.31■□□□□ 0.36
HMGA2P52926 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGA2P52926 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGA2P52926 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 SLC29A4P1-201ENST00000398760 971 ntBASIC17.31■□□□□ 0.36
HMGA2P52926 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.31■□□□□ 0.36
HMGA2P52926 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGA2P52926 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGA2P52926 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGA2P52926 AC068587.9-201ENST00000641814 219 ntBASIC17.31■□□□□ 0.36
HMGA2P52926 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 AC008764.6-201ENST00000595909 2069 ntBASIC17.31■□□□□ 0.36
HMGA2P52926 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGA2P52926 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGA2P52926 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 MTMR9LP-203ENST00000426597 1545 ntBASIC17.31■□□□□ 0.36
HMGA2P52926 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGA2P52926 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
HMGA2P52926 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGA2P52926 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HMGA2P52926 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGA2P52926 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
HMGA2P52926 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMGA2P52926 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGA2P52926 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HMGA2P52926 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HMGA2P52926 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HMGA2P52926 NCF1B-203ENST00000435988 1254 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms