Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 AC138035.3-201ENST00000622706 2791 ntBASIC13.12□□□□□ -0.31
PCP4P48539 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.12□□□□□ -0.31
PCP4P48539 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 AC108860.2-201ENST00000562760 2183 ntBASIC13.12□□□□□ -0.31
PCP4P48539 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
PCP4P48539 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.11□□□□□ -0.31
PCP4P48539 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC13.11□□□□□ -0.31
PCP4P48539 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.11□□□□□ -0.31
PCP4P48539 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.11□□□□□ -0.31
PCP4P48539 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PCP4P48539 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PCP4P48539 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
PCP4P48539 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.11□□□□□ -0.31
PCP4P48539 AC005252.3-201ENST00000623855 2258 ntBASIC13.11□□□□□ -0.31
PCP4P48539 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PCP4P48539 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PCP4P48539 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCP4P48539 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
PCP4P48539 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.11□□□□□ -0.31
PCP4P48539 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
PCP4P48539 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PCP4P48539 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
PCP4P48539 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.1□□□□□ -0.31
PCP4P48539 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 AC105917.1-201ENST00000506637 2539 ntBASIC13.1□□□□□ -0.31
PCP4P48539 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCP4P48539 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms