Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.99■□□□□ 0.79
RFC1P35251 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RFC1P35251 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RFC1P35251 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.99■□□□□ 0.79
RFC1P35251 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RFC1P35251 AC026271.3-201ENST00000571884 352 ntBASIC19.99■□□□□ 0.79
RFC1P35251 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RFC1P35251 AC130371.2-201ENST00000619443 611 ntBASIC19.99■□□□□ 0.79
RFC1P35251 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RFC1P35251 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC1P35251 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC1P35251 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC1P35251 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RFC1P35251 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RFC1P35251 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RFC1P35251 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC1P35251 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC1P35251 AC004951.3-201ENST00000418645 1148 ntBASIC19.98■□□□□ 0.79
RFC1P35251 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC1P35251 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFC1P35251 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC1P35251 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC1P35251 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC1P35251 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC1P35251 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC1P35251 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC1P35251 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC1P35251 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC1P35251 MESTP1-201ENST00000404287 994 ntBASIC19.97■□□□□ 0.79
RFC1P35251 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC1P35251 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RFC1P35251 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC1P35251 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC1P35251 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.97■□□□□ 0.79
RFC1P35251 AC233702.5-201ENST00000584107 538 ntBASIC19.97■□□□□ 0.79
RFC1P35251 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC1P35251 Z99916.2-201ENST00000604037 246 ntBASIC19.97■□□□□ 0.79
RFC1P35251 AC011298.2-201ENST00000617989 482 ntBASIC19.97■□□□□ 0.79
RFC1P35251 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RFC1P35251 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC1P35251 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RFC1P35251 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RFC1P35251 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC1P35251 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC1P35251 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFC1P35251 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC1P35251 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC1P35251 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RFC1P35251 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.96■□□□□ 0.79
RFC1P35251 AC012618.2-201ENST00000428058 849 ntBASIC19.96■□□□□ 0.79
RFC1P35251 B3GAT3P1-201ENST00000471720 806 ntBASIC19.96■□□□□ 0.79
RFC1P35251 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.96■□□□□ 0.79
RFC1P35251 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.96■□□□□ 0.79
RFC1P35251 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.96■□□□□ 0.79
RFC1P35251 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RFC1P35251 MIR6786-201ENST00000616843 113 ntBASIC19.96■□□□□ 0.79
RFC1P35251 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.96■□□□□ 0.79
RFC1P35251 AC113410.3-201ENST00000623366 203 ntBASIC19.96■□□□□ 0.79
RFC1P35251 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RFC1P35251 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC1P35251 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC1P35251 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC1P35251 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC1P35251 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RFC1P35251 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC1P35251 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC1P35251 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC1P35251 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RFC1P35251 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.95■□□□□ 0.78
RFC1P35251 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC1P35251 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.95■□□□□ 0.78
RFC1P35251 AL049637.2-201ENST00000641778 930 ntBASIC19.95■□□□□ 0.78
RFC1P35251 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.95■□□□□ 0.78
RFC1P35251 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFC1P35251 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms