Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.85■■□□□ 1.41
RFC4P35249 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.85■■□□□ 1.41
RFC4P35249 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFC4P35249 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.84■■□□□ 1.41
RFC4P35249 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.84■■□□□ 1.41
RFC4P35249 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.84■■□□□ 1.41
RFC4P35249 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFC4P35249 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFC4P35249 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RFC4P35249 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.84■■□□□ 1.41
RFC4P35249 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFC4P35249 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.84■■□□□ 1.41
RFC4P35249 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.84■■□□□ 1.41
RFC4P35249 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFC4P35249 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.84■■□□□ 1.41
RFC4P35249 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFC4P35249 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RFC4P35249 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.83■■□□□ 1.41
RFC4P35249 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.83■■□□□ 1.41
RFC4P35249 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
RFC4P35249 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.83■■□□□ 1.41
RFC4P35249 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 AC090616.6-201ENST00000582640 721 ntBASIC23.83■■□□□ 1.41
RFC4P35249 AC138894.3-201ENST00000603787 634 ntBASIC23.83■■□□□ 1.41
RFC4P35249 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.83■■□□□ 1.41
RFC4P35249 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFC4P35249 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RFC4P35249 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RFC4P35249 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFC4P35249 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
RFC4P35249 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.82■■□□□ 1.4
RFC4P35249 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.82■■□□□ 1.4
RFC4P35249 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.82■■□□□ 1.4
RFC4P35249 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.82■■□□□ 1.4
RFC4P35249 AC074051.2-201ENST00000565115 352 ntBASIC23.82■■□□□ 1.4
RFC4P35249 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
RFC4P35249 AL121912.1-201ENST00000603683 238 ntBASIC23.82■■□□□ 1.4
RFC4P35249 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 IGHV3-41-201ENST00000613121 348 ntBASIC23.82■■□□□ 1.4
RFC4P35249 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.82■■□□□ 1.4
RFC4P35249 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.82■■□□□ 1.4
RFC4P35249 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFC4P35249 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RFC4P35249 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RFC4P35249 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 AP000593.1-201ENST00000393668 712 ntBASIC23.81■■□□□ 1.4
RFC4P35249 MRPL3P1-201ENST00000400109 1033 ntBASIC23.81■■□□□ 1.4
RFC4P35249 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RFC4P35249 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.81■■□□□ 1.4
RFC4P35249 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.81■■□□□ 1.4
RFC4P35249 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.81■■□□□ 1.4
RFC4P35249 AC005332.3-201ENST00000589904 676 ntBASIC23.81■■□□□ 1.4
RFC4P35249 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 PKD1P6-201ENST00000343738 4769 ntBASIC23.81■■□□□ 1.4
RFC4P35249 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RFC4P35249 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.81■■□□□ 1.4
RFC4P35249 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFC4P35249 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.81■■□□□ 1.4
RFC4P35249 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RFC4P35249 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RFC4P35249 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.8■■□□□ 1.4
RFC4P35249 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
RFC4P35249 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.8■■□□□ 1.4
RFC4P35249 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFC4P35249 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms