Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CHRNA3P32297 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CHRNA3P32297 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHRNA3P32297 MIR4497-201ENST00000583208 89 ntBASIC20■□□□□ 0.79
CHRNA3P32297 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHRNA3P32297 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHRNA3P32297 AC004264.1-201ENST00000608354 794 ntBASIC20■□□□□ 0.79
CHRNA3P32297 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 AC007613.1-201ENST00000572811 2597 ntBASIC20■□□□□ 0.79
CHRNA3P32297 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA3P32297 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA3P32297 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA3P32297 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.99■□□□□ 0.79
CHRNA3P32297 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.99■□□□□ 0.79
CHRNA3P32297 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 AC135050.7-201ENST00000624508 2218 ntBASIC19.99■□□□□ 0.79
CHRNA3P32297 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHRNA3P32297 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.99■□□□□ 0.79
CHRNA3P32297 SNORA78-201ENST00000459373 127 ntBASIC19.99■□□□□ 0.79
CHRNA3P32297 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.99■□□□□ 0.79
CHRNA3P32297 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.99■□□□□ 0.79
CHRNA3P32297 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.99■□□□□ 0.79
CHRNA3P32297 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 AP001412.1-201ENST00000608405 714 ntBASIC19.99■□□□□ 0.79
CHRNA3P32297 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHRNA3P32297 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA3P32297 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA3P32297 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.98■□□□□ 0.79
CHRNA3P32297 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.98■□□□□ 0.79
CHRNA3P32297 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHRNA3P32297 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CHRNA3P32297 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHRNA3P32297 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.98■□□□□ 0.79
CHRNA3P32297 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHRNA3P32297 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.98■□□□□ 0.79
CHRNA3P32297 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA3P32297 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA3P32297 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHRNA3P32297 AL512353.2-201ENST00000448759 1962 ntBASIC19.97■□□□□ 0.79
CHRNA3P32297 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA3P32297 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CHRNA3P32297 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.97■□□□□ 0.79
CHRNA3P32297 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.97■□□□□ 0.79
CHRNA3P32297 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.97■□□□□ 0.79
CHRNA3P32297 AL049637.2-201ENST00000641778 930 ntBASIC19.97■□□□□ 0.79
CHRNA3P32297 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA3P32297 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA3P32297 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms