Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDF1P27539 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF1P27539 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 BX664615.1-201ENST00000443558 458 ntBASIC17.2■□□□□ 0.34
GDF1P27539 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.2■□□□□ 0.34
GDF1P27539 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.2■□□□□ 0.34
GDF1P27539 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDF1P27539 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF1P27539 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.2■□□□□ 0.34
GDF1P27539 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.2■□□□□ 0.34
GDF1P27539 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.2■□□□□ 0.34
GDF1P27539 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF1P27539 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF1P27539 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF1P27539 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.2■□□□□ 0.34
GDF1P27539 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
GDF1P27539 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
GDF1P27539 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF1P27539 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GDF1P27539 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF1P27539 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GDF1P27539 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
GDF1P27539 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.19■□□□□ 0.34
GDF1P27539 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GDF1P27539 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.19■□□□□ 0.34
GDF1P27539 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 TEX21P-204ENST00000641479 1693 ntBASIC17.19■□□□□ 0.34
GDF1P27539 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF1P27539 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF1P27539 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF1P27539 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.18■□□□□ 0.34
GDF1P27539 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF1P27539 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.18■□□□□ 0.34
GDF1P27539 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.18■□□□□ 0.34
GDF1P27539 AC006011.2-201ENST00000621313 1158 ntBASIC17.18■□□□□ 0.34
GDF1P27539 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF1P27539 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 AC141257.4-201ENST00000634557 245 ntBASIC17.18■□□□□ 0.34
GDF1P27539 AC136944.6-201ENST00000634818 245 ntBASIC17.18■□□□□ 0.34
GDF1P27539 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF1P27539 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF1P27539 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF1P27539 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms