Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LAMA1P25391 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LAMA1P25391 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.56■□□□□ 0.56
LAMA1P25391 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.56■□□□□ 0.56
LAMA1P25391 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LAMA1P25391 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.56■□□□□ 0.56
LAMA1P25391 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.56■□□□□ 0.56
LAMA1P25391 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LAMA1P25391 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.56■□□□□ 0.56
LAMA1P25391 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.56■□□□□ 0.56
LAMA1P25391 BX640515.1-201ENST00000617215 977 ntBASIC18.56■□□□□ 0.56
LAMA1P25391 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
LAMA1P25391 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.56■□□□□ 0.56
LAMA1P25391 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LAMA1P25391 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.55■□□□□ 0.56
LAMA1P25391 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.55■□□□□ 0.56
LAMA1P25391 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.55■□□□□ 0.56
LAMA1P25391 REXO1L6P-202ENST00000619970 1078 ntBASIC18.55■□□□□ 0.56
LAMA1P25391 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LAMA1P25391 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.55■□□□□ 0.56
LAMA1P25391 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.55■□□□□ 0.56
LAMA1P25391 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LAMA1P25391 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.55■□□□□ 0.56
LAMA1P25391 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.55■□□□□ 0.56
LAMA1P25391 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.55■□□□□ 0.56
LAMA1P25391 KRT8P26-201ENST00000534154 1276 ntBASIC18.55■□□□□ 0.56
LAMA1P25391 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.55■□□□□ 0.56
LAMA1P25391 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.55■□□□□ 0.56
LAMA1P25391 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.55■□□□□ 0.56
LAMA1P25391 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.55■□□□□ 0.56
LAMA1P25391 TOB2P1-201ENST00000469761 992 ntBASIC18.55■□□□□ 0.56
LAMA1P25391 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.55■□□□□ 0.56
LAMA1P25391 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LAMA1P25391 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 NUS1P1-201ENST00000446295 882 ntBASIC18.54■□□□□ 0.56
LAMA1P25391 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 SLC25A1P1-201ENST00000528351 927 ntBASIC18.54■□□□□ 0.56
LAMA1P25391 AC091304.2-201ENST00000564639 760 ntBASIC18.54■□□□□ 0.56
LAMA1P25391 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.54■□□□□ 0.56
LAMA1P25391 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.54■□□□□ 0.56
LAMA1P25391 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.54■□□□□ 0.56
LAMA1P25391 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.54■□□□□ 0.56
LAMA1P25391 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.54■□□□□ 0.56
LAMA1P25391 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.54■□□□□ 0.56
LAMA1P25391 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LAMA1P25391 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.53■□□□□ 0.56
LAMA1P25391 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.53■□□□□ 0.56
LAMA1P25391 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.53■□□□□ 0.56
LAMA1P25391 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms