Protein–RNA interactions for Protein: P18505

GABRB1, Gamma-aminobutyric acid receptor subunit beta-1, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1P18505 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB1P18505 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GABRB1P18505 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.11■□□□□ 0.33
GABRB1P18505 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB1P18505 RPS2P52-201ENST00000469610 820 ntBASIC17.11■□□□□ 0.33
GABRB1P18505 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB1P18505 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GABRB1P18505 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 AC139713.2-201ENST00000641328 2723 ntBASIC17.11■□□□□ 0.33
GABRB1P18505 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB1P18505 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRB1P18505 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRB1P18505 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRB1P18505 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 AC016769.1-201ENST00000409132 1010 ntBASIC17.1■□□□□ 0.33
GABRB1P18505 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRB1P18505 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRB1P18505 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRB1P18505 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GABRB1P18505 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRB1P18505 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRB1P18505 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB1P18505 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GABRB1P18505 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
GABRB1P18505 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRB1P18505 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
GABRB1P18505 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRB1P18505 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.09■□□□□ 0.33
GABRB1P18505 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.09■□□□□ 0.33
GABRB1P18505 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.09■□□□□ 0.33
GABRB1P18505 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRB1P18505 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.09■□□□□ 0.33
GABRB1P18505 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 AL499627.1-201ENST00000569373 2188 ntBASIC17.09■□□□□ 0.33
GABRB1P18505 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRB1P18505 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GABRB1P18505 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRB1P18505 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GABRB1P18505 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.08■□□□□ 0.33
GABRB1P18505 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GABRB1P18505 AC135776.1-201ENST00000319817 2481 ntBASIC17.08■□□□□ 0.33
GABRB1P18505 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
GABRB1P18505 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GABRB1P18505 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GABRB1P18505 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GABRB1P18505 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GABRB1P18505 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GABRB1P18505 HEIH-201ENST00000623091 1652 ntBASIC17.08■□□□□ 0.32
GABRB1P18505 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABRB1P18505 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.08■□□□□ 0.32
GABRB1P18505 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GABRB1P18505 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GABRB1P18505 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GABRB1P18505 TSPY21P-201ENST00000433481 731 ntBASIC17.08■□□□□ 0.32
GABRB1P18505 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GABRB1P18505 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.08■□□□□ 0.32
GABRB1P18505 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GABRB1P18505 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.08■□□□□ 0.32
GABRB1P18505 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.08■□□□□ 0.32
GABRB1P18505 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABRB1P18505 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
GABRB1P18505 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABRB1P18505 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GABRB1P18505 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABRB1P18505 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.08■□□□□ 0.32
GABRB1P18505 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms