Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
VCLP18206 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.06■□□□□ 0.64
VCLP18206 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
VCLP18206 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VCLP18206 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.06■□□□□ 0.64
VCLP18206 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VCLP18206 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.06■□□□□ 0.64
VCLP18206 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.06■□□□□ 0.64
VCLP18206 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
VCLP18206 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.06■□□□□ 0.64
VCLP18206 NUDT16P1-203ENST00000513809 620 ntBASIC19.06■□□□□ 0.64
VCLP18206 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.06■□□□□ 0.64
VCLP18206 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.06■□□□□ 0.64
VCLP18206 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.06■□□□□ 0.64
VCLP18206 HLA-A-209ENST00000638375 975 ntBASIC19.06■□□□□ 0.64
VCLP18206 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.06■□□□□ 0.64
VCLP18206 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VCLP18206 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VCLP18206 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
VCLP18206 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VCLP18206 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VCLP18206 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.05■□□□□ 0.64
VCLP18206 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.05■□□□□ 0.64
VCLP18206 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
VCLP18206 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.05■□□□□ 0.64
VCLP18206 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.05■□□□□ 0.64
VCLP18206 AP003071.4-201ENST00000562276 1284 ntBASIC19.05■□□□□ 0.64
VCLP18206 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.05■□□□□ 0.64
VCLP18206 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VCLP18206 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCLP18206 AL032819.2-201ENST00000624543 2162 ntBASIC19.05■□□□□ 0.64
VCLP18206 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.05■□□□□ 0.64
VCLP18206 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VCLP18206 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCLP18206 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.04■□□□□ 0.64
VCLP18206 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VCLP18206 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.04■□□□□ 0.64
VCLP18206 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCLP18206 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
VCLP18206 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VCLP18206 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VCLP18206 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCLP18206 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCLP18206 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
VCLP18206 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
VCLP18206 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCLP18206 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.04■□□□□ 0.64
VCLP18206 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCLP18206 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
VCLP18206 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.03■□□□□ 0.64
VCLP18206 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.03■□□□□ 0.64
VCLP18206 HCG11-201ENST00000411553 5696 ntBASIC19.03■□□□□ 0.64
VCLP18206 LTB4R2-202ENST00000528054 3092 ntBASIC19.03■□□□□ 0.64
VCLP18206 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.03■□□□□ 0.64
VCLP18206 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.03■□□□□ 0.64
VCLP18206 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VCLP18206 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.03■□□□□ 0.64
VCLP18206 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCLP18206 FSCN1P1-201ENST00000568912 1481 ntBASIC19.03■□□□□ 0.64
VCLP18206 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCLP18206 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms