Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HNRNPCL4P0DMR1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNRNPCL4P0DMR1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNRNPCL4P0DMR1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNRNPCL4P0DMR1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 AC133681.1-201ENST00000465482 601 ntBASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNRNPCL4P0DMR1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 WIZP1-201ENST00000531444 2299 ntBASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 RN7SL471P-201ENST00000580476 299 ntBASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 AC124016.1-201ENST00000609552 612 ntBASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 AC110285.5-201ENST00000611501 352 ntBASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNRNPCL4P0DMR1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 Z85996.1-201ENST00000494644 937 ntBASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 AL445675.2-201ENST00000620291 557 ntBASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 AC090340.1-201ENST00000620778 4980 ntBASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.6■□□□□ 0.41
HNRNPCL4P0DMR1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms