Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCRP04035 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCRP04035 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCRP04035 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HMGCRP04035 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCRP04035 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.39■■□□□ 1.02
HMGCRP04035 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
HMGCRP04035 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
HMGCRP04035 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
HMGCRP04035 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCRP04035 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCRP04035 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HMGCRP04035 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGCRP04035 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HMGCRP04035 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.39■■□□□ 1.01
HMGCRP04035 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.39■■□□□ 1.01
HMGCRP04035 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.39■■□□□ 1.01
HMGCRP04035 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGCRP04035 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 AL391807.1-203ENST00000604392 2365 ntBASIC21.39■■□□□ 1.01
HMGCRP04035 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
HMGCRP04035 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.39■■□□□ 1.01
HMGCRP04035 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCRP04035 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGCRP04035 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGCRP04035 AL512408.1-201ENST00000569378 2000 ntBASIC21.38■■□□□ 1.01
HMGCRP04035 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGCRP04035 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.38■■□□□ 1.01
HMGCRP04035 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGCRP04035 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGCRP04035 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HMGCRP04035 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCRP04035 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGCRP04035 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGCRP04035 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCRP04035 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HMGCRP04035 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCRP04035 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HMGCRP04035 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCRP04035 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
HMGCRP04035 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HMGCRP04035 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 MCCD1P1-208ENST00000445732 328 ntBASIC21.37■■□□□ 1.01
HMGCRP04035 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
HMGCRP04035 AC079776.4-201ENST00000511039 504 ntBASIC21.37■■□□□ 1.01
HMGCRP04035 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
HMGCRP04035 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.37■■□□□ 1.01
HMGCRP04035 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.37■■□□□ 1.01
HMGCRP04035 RNF126P1-202ENST00000569893 925 ntBASIC21.37■■□□□ 1.01
HMGCRP04035 MIR3917-201ENST00000580971 93 ntBASIC21.37■■□□□ 1.01
HMGCRP04035 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.37■■□□□ 1.01
HMGCRP04035 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGCRP04035 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCRP04035 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGCRP04035 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGCRP04035 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCRP04035 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGCRP04035 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
HMGCRP04035 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 AC104417.2-201ENST00000562989 1793 ntBASIC21.36■■□□□ 1.01
HMGCRP04035 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HMGCRP04035 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCRP04035 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms