Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DRAP01903 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DRAP01903 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DRAP01903 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DRAP01903 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-DRAP01903 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
HLA-DRAP01903 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DRAP01903 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.41■□□□□ 0.86
HLA-DRAP01903 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HLA-DRAP01903 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HLA-DRAP01903 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 KRT8P3-201ENST00000519669 1449 ntBASIC20.4■□□□□ 0.86
HLA-DRAP01903 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.4■□□□□ 0.86
HLA-DRAP01903 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HLA-DRAP01903 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.4■□□□□ 0.86
HLA-DRAP01903 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
HLA-DRAP01903 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DRAP01903 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.39■□□□□ 0.86
HLA-DRAP01903 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DRAP01903 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
HLA-DRAP01903 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DRAP01903 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DRAP01903 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.39■□□□□ 0.85
HLA-DRAP01903 KRT8P9-201ENST00000558927 1449 ntBASIC20.39■□□□□ 0.85
HLA-DRAP01903 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DRAP01903 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DRAP01903 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HLA-DRAP01903 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HLA-DRAP01903 TNXA-203ENST00000507684 2038 ntBASIC20.38■□□□□ 0.85
HLA-DRAP01903 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HLA-DRAP01903 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
HLA-DRAP01903 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.38■□□□□ 0.85
HLA-DRAP01903 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DRAP01903 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DRAP01903 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DRAP01903 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.37■□□□□ 0.85
HLA-DRAP01903 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DRAP01903 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DRAP01903 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DRAP01903 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DRAP01903 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms