Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCN1O60741 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HCN1O60741 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.73■□□□□ 0.43
HCN1O60741 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HCN1O60741 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.73■□□□□ 0.43
HCN1O60741 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.73■□□□□ 0.43
HCN1O60741 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.73■□□□□ 0.43
HCN1O60741 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.73■□□□□ 0.43
HCN1O60741 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 CR392000.1-201ENST00000624770 1228 ntBASIC17.73■□□□□ 0.43
HCN1O60741 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
HCN1O60741 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.73■□□□□ 0.43
HCN1O60741 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HCN1O60741 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HCN1O60741 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.73■□□□□ 0.43
HCN1O60741 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.73■□□□□ 0.43
HCN1O60741 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCN1O60741 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.72■□□□□ 0.43
HCN1O60741 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HCN1O60741 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.72■□□□□ 0.43
HCN1O60741 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.72■□□□□ 0.43
HCN1O60741 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.72■□□□□ 0.43
HCN1O60741 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.72■□□□□ 0.43
HCN1O60741 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCN1O60741 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.71■□□□□ 0.43
HCN1O60741 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
HCN1O60741 LINC01465-201ENST00000408887 1940 ntBASIC17.71■□□□□ 0.43
HCN1O60741 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.71■□□□□ 0.43
HCN1O60741 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.71■□□□□ 0.43
HCN1O60741 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 ECEL1P3-201ENST00000427961 737 ntBASIC17.71■□□□□ 0.43
HCN1O60741 TSPY15P-201ENST00000457163 923 ntBASIC17.71■□□□□ 0.43
HCN1O60741 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.71■□□□□ 0.43
HCN1O60741 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.71■□□□□ 0.43
HCN1O60741 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.71■□□□□ 0.43
HCN1O60741 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.71■□□□□ 0.43
HCN1O60741 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.71■□□□□ 0.43
HCN1O60741 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
HCN1O60741 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.71■□□□□ 0.43
HCN1O60741 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HCN1O60741 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.71■□□□□ 0.43
HCN1O60741 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HCN1O60741 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HCN1O60741 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.71■□□□□ 0.42
HCN1O60741 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.71■□□□□ 0.42
HCN1O60741 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HCN1O60741 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.7■□□□□ 0.42
HCN1O60741 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 AC087499.1-201ENST00000418141 1075 ntBASIC17.7■□□□□ 0.42
HCN1O60741 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms