Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK1AO00322 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18■□□□□ 0.47
UPK1AO00322 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18■□□□□ 0.47
UPK1AO00322 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18■□□□□ 0.47
UPK1AO00322 AC068880.1-201ENST00000507289 2297 ntBASIC18■□□□□ 0.47
UPK1AO00322 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1AO00322 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UPK1AO00322 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18■□□□□ 0.47
UPK1AO00322 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18■□□□□ 0.47
UPK1AO00322 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18■□□□□ 0.47
UPK1AO00322 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18■□□□□ 0.47
UPK1AO00322 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1AO00322 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18■□□□□ 0.47
UPK1AO00322 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18■□□□□ 0.47
UPK1AO00322 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18■□□□□ 0.47
UPK1AO00322 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPK1AO00322 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPK1AO00322 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18■□□□□ 0.47
UPK1AO00322 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
UPK1AO00322 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18■□□□□ 0.47
UPK1AO00322 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1AO00322 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1AO00322 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18■□□□□ 0.47
UPK1AO00322 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK1AO00322 AP000997.3-201ENST00000623333 2250 ntBASIC18■□□□□ 0.47
UPK1AO00322 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UPK1AO00322 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK1AO00322 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK1AO00322 KRT18P29-201ENST00000397031 1267 ntBASIC17.99■□□□□ 0.47
UPK1AO00322 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.99■□□□□ 0.47
UPK1AO00322 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK1AO00322 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.99■□□□□ 0.47
UPK1AO00322 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.99■□□□□ 0.47
UPK1AO00322 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
UPK1AO00322 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
UPK1AO00322 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPK1AO00322 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK1AO00322 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
UPK1AO00322 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UPK1AO00322 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.98■□□□□ 0.47
UPK1AO00322 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.98■□□□□ 0.47
UPK1AO00322 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.98■□□□□ 0.47
UPK1AO00322 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.98■□□□□ 0.47
UPK1AO00322 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UPK1AO00322 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.98■□□□□ 0.47
UPK1AO00322 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.98■□□□□ 0.47
UPK1AO00322 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.98■□□□□ 0.47
UPK1AO00322 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.98■□□□□ 0.47
UPK1AO00322 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
UPK1AO00322 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.98■□□□□ 0.47
UPK1AO00322 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.98■□□□□ 0.47
UPK1AO00322 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.98■□□□□ 0.47
UPK1AO00322 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1AO00322 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK1AO00322 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
UPK1AO00322 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.97■□□□□ 0.47
UPK1AO00322 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK1AO00322 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.97■□□□□ 0.47
UPK1AO00322 AL160286.2-201ENST00000567150 934 ntBASIC17.97■□□□□ 0.47
UPK1AO00322 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.97■□□□□ 0.47
UPK1AO00322 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UPK1AO00322 AL359736.2-201ENST00000621992 437 ntBASIC17.97■□□□□ 0.47
UPK1AO00322 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
UPK1AO00322 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK1AO00322 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UPK1AO00322 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms