Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
AP3B1O00203 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.17■□□□□ 0.66
AP3B1O00203 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3B1O00203 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.17■□□□□ 0.66
AP3B1O00203 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.16■□□□□ 0.66
AP3B1O00203 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.16■□□□□ 0.66
AP3B1O00203 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
AP3B1O00203 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
AP3B1O00203 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.16■□□□□ 0.66
AP3B1O00203 C1QBPP2-201ENST00000528754 825 ntBASIC19.16■□□□□ 0.66
AP3B1O00203 RARRES2P10-201ENST00000564312 460 ntBASIC19.16■□□□□ 0.66
AP3B1O00203 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
AP3B1O00203 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.16■□□□□ 0.66
AP3B1O00203 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.16■□□□□ 0.66
AP3B1O00203 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
AP3B1O00203 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.16■□□□□ 0.66
AP3B1O00203 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.16■□□□□ 0.66
AP3B1O00203 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3B1O00203 KRT16P1-201ENST00000399124 1418 ntBASIC19.16■□□□□ 0.66
AP3B1O00203 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
AP3B1O00203 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.15■□□□□ 0.66
AP3B1O00203 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
AP3B1O00203 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.15■□□□□ 0.66
AP3B1O00203 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.15■□□□□ 0.66
AP3B1O00203 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 AL031985.4-201ENST00000642138 673 ntBASIC19.15■□□□□ 0.66
AP3B1O00203 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
AP3B1O00203 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
AP3B1O00203 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
AP3B1O00203 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3B1O00203 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
AP3B1O00203 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
AP3B1O00203 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 AC004951.3-201ENST00000418645 1148 ntBASIC19.14■□□□□ 0.65
AP3B1O00203 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.14■□□□□ 0.65
AP3B1O00203 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.14■□□□□ 0.65
AP3B1O00203 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.14■□□□□ 0.65
AP3B1O00203 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
AP3B1O00203 KRT8P11-201ENST00000409686 1436 ntBASIC19.14■□□□□ 0.65
AP3B1O00203 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms