Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TVP23AA6NH52 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TVP23AA6NH52 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TVP23AA6NH52 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 HTR7P1-202ENST00000624664 4411 ntBASIC16.95■□□□□ 0.3
TVP23AA6NH52 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 RNA5SP413-201ENST00000516373 109 ntBASIC16.95■□□□□ 0.3
TVP23AA6NH52 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
TVP23AA6NH52 AL512353.2-201ENST00000448759 1962 ntBASIC16.95■□□□□ 0.3
TVP23AA6NH52 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TVP23AA6NH52 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TVP23AA6NH52 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TVP23AA6NH52 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TVP23AA6NH52 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.93■□□□□ 0.3
TVP23AA6NH52 HLA-A-209ENST00000638375 975 ntBASIC16.93■□□□□ 0.3
TVP23AA6NH52 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms