Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV5S1A1TA0A578 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV5S1A1TA0A578 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 AC009113.1-201ENST00000570267 2443 ntBASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 MFAP1P1-201ENST00000442257 1255 ntBASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV5S1A1TA0A578 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 TSPY7P-201ENST00000431358 1114 ntBASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 AP003071.4-201ENST00000562276 1284 ntBASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV5S1A1TA0A578 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV5S1A1TA0A578 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
TCRBV5S1A1TA0A578 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms