Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 AL031598.1-201ENST00000561511 1773 ntBASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC004980.1-204ENST00000429707 299 ntBASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 RPPH1-201ENST00000516869 333 ntBASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV6-4A0A1B0GX49 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRBV6-4A0A1B0GX49 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRBV6-4A0A1B0GX49 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TRBV6-4A0A1B0GX49 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRBV6-4A0A1B0GX49 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AL031985.4-201ENST00000642138 673 ntBASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 KRT16P1-201ENST00000399124 1418 ntBASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 AL135905.2-201ENST00000584934 1404 ntBASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-4A0A1B0GX49 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-4A0A1B0GX49 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms