Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 TSPY6P-201ENST00000448518 926 ntBASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 AC091874.3-201ENST00000512672 1195 ntBASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-4A0A0B4J246 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 AC116351.2-201ENST00000606540 1585 ntBASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-4A0A0B4J246 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms