Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 ECEL1P2-202ENST00000465689 757 ntBASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 AC011298.2-201ENST00000617989 482 ntBASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 SLC25A1P4-201ENST00000567977 778 ntBASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 FAM87A-204ENST00000613235 858 ntBASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA6Q9Y5G7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 AC006011.2-201ENST00000621313 1158 ntBASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA6Q9Y5G7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 NTF6B-201ENST00000591913 560 ntBASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA6Q9Y5G7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA6Q9Y5G7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
PCDHGA6Q9Y5G7 NEFHP1-201ENST00000412845 2629 ntBASIC18.27■□□□□ 0.51
PCDHGA6Q9Y5G7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA6Q9Y5G7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PCDHGA6Q9Y5G7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA6Q9Y5G7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms