Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCL1Q9Y2P8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 TFP1-202ENST00000475455 1573 ntBASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.53■□□□□ 0.08
RCL1Q9Y2P8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RCL1Q9Y2P8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.52■□□□□ 0.07
RCL1Q9Y2P8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 AC099398.1-201ENST00000567919 2776 ntBASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RCL1Q9Y2P8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms