Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC018553.1-201ENST00000616682 1458 ntBASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 ESPNP-201ENST00000270691 2015 ntBASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COMMD3Q9UBI1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD3Q9UBI1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.71■□□□□ 0.26
COMMD3Q9UBI1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
COMMD3Q9UBI1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 AL591742.1-201ENST00000604433 565 ntBASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 SDHAP1-207ENST00000440850 2000 ntBASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COMMD3Q9UBI1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms