Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC092850.2-201ENST00000623821 2697 ntBASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 SLC7A5P1-201ENST00000568957 537 ntBASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 MIR6084-201ENST00000622012 110 ntBASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.65■□□□□ 0.42
CHCHD3Q9NX63 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CHCHD3Q9NX63 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHCHD3Q9NX63 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHCHD3Q9NX63 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHCHD3Q9NX63 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AC067852.2-201ENST00000590513 2313 ntBASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.63■□□□□ 0.41
CHCHD3Q9NX63 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHCHD3Q9NX63 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms