Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD248Q9HCU0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD248Q9HCU0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CD248Q9HCU0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 KRT18P16-201ENST00000510337 1294 ntBASIC19.91■□□□□ 0.78
CD248Q9HCU0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 AC026271.3-201ENST00000571884 352 ntBASIC19.91■□□□□ 0.78
CD248Q9HCU0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 AL445228.2-201ENST00000605589 952 ntBASIC19.91■□□□□ 0.78
CD248Q9HCU0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 AC073508.3-201ENST00000619697 1419 ntBASIC19.91■□□□□ 0.78
CD248Q9HCU0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD248Q9HCU0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.91■□□□□ 0.78
CD248Q9HCU0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 AC005521.1-201ENST00000393351 872 ntBASIC19.9■□□□□ 0.78
CD248Q9HCU0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 AC005363.2-201ENST00000618631 242 ntBASIC19.9■□□□□ 0.78
CD248Q9HCU0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CD248Q9HCU0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD248Q9HCU0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CD248Q9HCU0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 AC113347.1-201ENST00000413321 391 ntBASIC19.89■□□□□ 0.77
CD248Q9HCU0 YBX1P10-201ENST00000444752 975 ntBASIC19.89■□□□□ 0.77
CD248Q9HCU0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms