Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX47Q9H0S4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 AC126763.1-201ENST00000552015 2118 ntBASIC19.79■□□□□ 0.76
DDX47Q9H0S4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 CDCA4P2-201ENST00000441182 718 ntBASIC19.79■□□□□ 0.76
DDX47Q9H0S4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DDX47Q9H0S4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 AC092437.1-201ENST00000624794 1048 ntBASIC19.78■□□□□ 0.76
DDX47Q9H0S4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX47Q9H0S4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 FZD10-202ENST00000539839 3282 ntBASIC19.77■□□□□ 0.76
DDX47Q9H0S4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 ABALON-201ENST00000629058 1903 ntBASIC19.77■□□□□ 0.76
DDX47Q9H0S4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.77■□□□□ 0.76
DDX47Q9H0S4 AC091874.3-201ENST00000512672 1195 ntBASIC19.77■□□□□ 0.76
DDX47Q9H0S4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 AC067852.2-201ENST00000590513 2313 ntBASIC19.77■□□□□ 0.76
DDX47Q9H0S4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms