Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.66□□□□□ -0.38
LITAFQ99732 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.66□□□□□ -0.38
LITAFQ99732 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.66□□□□□ -0.38
LITAFQ99732 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LITAFQ99732 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LITAFQ99732 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LITAFQ99732 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC12.66□□□□□ -0.38
LITAFQ99732 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.66□□□□□ -0.38
LITAFQ99732 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.66□□□□□ -0.38
LITAFQ99732 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LITAFQ99732 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LITAFQ99732 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LITAFQ99732 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LITAFQ99732 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC12.66□□□□□ -0.38
LITAFQ99732 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.66□□□□□ -0.38
LITAFQ99732 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LITAFQ99732 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LITAFQ99732 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LITAFQ99732 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LITAFQ99732 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LITAFQ99732 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.65□□□□□ -0.38
LITAFQ99732 MFSD11-216ENST00000590393 1141 ntBASIC12.65□□□□□ -0.38
LITAFQ99732 AC105020.6-201ENST00000621523 1217 ntBASIC12.65□□□□□ -0.38
LITAFQ99732 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LITAFQ99732 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC12.65□□□□□ -0.38
LITAFQ99732 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.65□□□□□ -0.38
LITAFQ99732 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
LITAFQ99732 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.65□□□□□ -0.39
LITAFQ99732 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.65□□□□□ -0.39
LITAFQ99732 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LITAFQ99732 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.64□□□□□ -0.39
LITAFQ99732 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 TFP1-202ENST00000475455 1573 ntBASIC12.64□□□□□ -0.39
LITAFQ99732 AL139384.1-201ENST00000612143 3047 ntBASIC12.64□□□□□ -0.39
LITAFQ99732 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.64□□□□□ -0.39
LITAFQ99732 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC12.64□□□□□ -0.39
LITAFQ99732 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.64□□□□□ -0.39
LITAFQ99732 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
LITAFQ99732 AP001330.3-201ENST00000520123 633 ntBASIC12.64□□□□□ -0.39
LITAFQ99732 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC12.64□□□□□ -0.39
LITAFQ99732 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LITAFQ99732 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.64□□□□□ -0.39
LITAFQ99732 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LITAFQ99732 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.63□□□□□ -0.39
LITAFQ99732 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
LITAFQ99732 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
LITAFQ99732 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms