Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CGREF1Q99674 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.06■□□□□ 0.48
CGREF1Q99674 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CGREF1Q99674 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CGREF1Q99674 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CGREF1Q99674 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.05■□□□□ 0.48
CGREF1Q99674 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CGREF1Q99674 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.05■□□□□ 0.48
CGREF1Q99674 AC026185.1-201ENST00000445748 174 ntBASIC18.05■□□□□ 0.48
CGREF1Q99674 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.05■□□□□ 0.48
CGREF1Q99674 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.05■□□□□ 0.48
CGREF1Q99674 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CGREF1Q99674 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CGREF1Q99674 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.05■□□□□ 0.48
CGREF1Q99674 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.05■□□□□ 0.48
CGREF1Q99674 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.05■□□□□ 0.48
CGREF1Q99674 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.05■□□□□ 0.48
CGREF1Q99674 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.05■□□□□ 0.48
CGREF1Q99674 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CGREF1Q99674 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.04■□□□□ 0.48
CGREF1Q99674 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CGREF1Q99674 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CGREF1Q99674 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.04■□□□□ 0.48
CGREF1Q99674 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CGREF1Q99674 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.04■□□□□ 0.48
CGREF1Q99674 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.04■□□□□ 0.48
CGREF1Q99674 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 AC092368.3-202ENST00000574180 1591 ntBASIC18.04■□□□□ 0.48
CGREF1Q99674 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CGREF1Q99674 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.04■□□□□ 0.48
CGREF1Q99674 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.03■□□□□ 0.48
CGREF1Q99674 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CGREF1Q99674 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CGREF1Q99674 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.03■□□□□ 0.48
CGREF1Q99674 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.03■□□□□ 0.48
CGREF1Q99674 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.03■□□□□ 0.48
CGREF1Q99674 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.03■□□□□ 0.48
CGREF1Q99674 NOC2LP2-201ENST00000407594 1944 ntBASIC18.03■□□□□ 0.48
CGREF1Q99674 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.03■□□□□ 0.48
CGREF1Q99674 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.03■□□□□ 0.48
CGREF1Q99674 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CGREF1Q99674 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGREF1Q99674 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.02■□□□□ 0.48
CGREF1Q99674 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.02■□□□□ 0.48
CGREF1Q99674 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms