Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 AC011767.1-201ENST00000617410 1153 ntBASIC17.18■□□□□ 0.34
APH1BQ8WW43 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 AC008694.1-202ENST00000636953 945 ntBASIC17.18■□□□□ 0.34
APH1BQ8WW43 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1BQ8WW43 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1BQ8WW43 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 AC134043.2-201ENST00000624206 2238 ntBASIC17.17■□□□□ 0.34
APH1BQ8WW43 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 AC093787.1-201ENST00000450396 207 ntBASIC17.17■□□□□ 0.34
APH1BQ8WW43 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APH1BQ8WW43 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1BQ8WW43 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 AC073210.2-201ENST00000430369 194 ntBASIC17.16■□□□□ 0.34
APH1BQ8WW43 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 OR10C1-204ENST00000622521 1039 ntBASIC17.16■□□□□ 0.34
APH1BQ8WW43 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1BQ8WW43 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.16■□□□□ 0.34
APH1BQ8WW43 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms