Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 AC104390.1-201ENST00000555663 520 ntBASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 AL845331.1-201ENST00000424978 1190 ntBASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 GPR32P1-201ENST00000601788 811 ntBASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 AC010240.3-201ENST00000607688 395 ntBASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 AC004263.2-201ENST00000617183 678 ntBASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 AC074051.2-201ENST00000565115 352 ntBASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL27A1Q8IZC6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
COL27A1Q8IZC6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL27A1Q8IZC6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.89■□□□□ 0.46
COL27A1Q8IZC6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COL27A1Q8IZC6 LINC00167-201ENST00000530583 1419 ntBASIC17.89■□□□□ 0.46
COL27A1Q8IZC6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 FAAHP1-202ENST00000446499 1238 ntBASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 AL137060.1-201ENST00000618151 2648 ntBASIC17.89■□□□□ 0.45
COL27A1Q8IZC6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 AC112497.1-201ENST00000624824 639 ntBASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms