Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 EDA-201ENST00000338901 1233 ntBASIC12.05□□□□□ -0.48
LINC00575Q6W349 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 AC023632.3-201ENST00000521633 145 ntBASIC12.05□□□□□ -0.48
LINC00575Q6W349 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 TESC-206ENST00000541210 936 ntTSL 3 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 MIR6084-201ENST00000622012 110 ntBASIC12.05□□□□□ -0.48
LINC00575Q6W349 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 FEM1AP3-201ENST00000403722 1741 ntBASIC12.05□□□□□ -0.48
LINC00575Q6W349 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00575Q6W349 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00575Q6W349 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 LINC00896-202ENST00000609602 2128 ntBASIC12.04□□□□□ -0.48
LINC00575Q6W349 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 NME4-202ENST00000382940 766 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 YBX1P1-201ENST00000445822 960 ntBASIC12.04□□□□□ -0.48
LINC00575Q6W349 AC091305.1-201ENST00000479476 895 ntBASIC12.04□□□□□ -0.48
LINC00575Q6W349 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 NME4-211ENST00000620944 1193 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00575Q6W349 AC116351.2-201ENST00000606540 1585 ntBASIC12.04□□□□□ -0.48
LINC00575Q6W349 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00575Q6W349 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SDHAP1-207ENST00000440850 2000 ntBASIC12.03□□□□□ -0.48
LINC00575Q6W349 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 AC126763.1-201ENST00000552015 2118 ntBASIC12.03□□□□□ -0.48
LINC00575Q6W349 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms