Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 HOMER2P1-201ENST00000455653 964 ntBASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC27A1Q6PCB7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 IRX1P1-201ENST00000438849 1838 ntBASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 MYC-208ENST00000641036 567 ntBASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC27A1Q6PCB7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 MCCD1P1-208ENST00000445732 328 ntBASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 AC093484.2-201ENST00000580996 2166 ntBASIC20.55■□□□□ 0.88
SLC27A1Q6PCB7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 AC036111.1-201ENST00000533973 1582 ntBASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC27A1Q6PCB7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms