Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB5BP61020 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB5BP61020 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB5BP61020 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB5BP61020 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.92□□□□□ -0.02
RAB5BP61020 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB5BP61020 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB5BP61020 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RAB5BP61020 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 AC108860.2-201ENST00000562760 2183 ntBASIC14.91□□□□□ -0.02
RAB5BP61020 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.91□□□□□ -0.02
RAB5BP61020 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB5BP61020 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB5BP61020 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RAB5BP61020 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RAB5BP61020 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB5BP61020 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB5BP61020 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RAB5BP61020 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RAB5BP61020 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB5BP61020 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB5BP61020 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB5BP61020 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB5BP61020 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB5BP61020 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB5BP61020 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB5BP61020 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB5BP61020 AL499627.2-201ENST00000606283 725 ntBASIC14.9□□□□□ -0.02
RAB5BP61020 AC087239.1-201ENST00000622671 572 ntBASIC14.9□□□□□ -0.02
RAB5BP61020 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB5BP61020 AL512353.2-201ENST00000448759 1962 ntBASIC14.9□□□□□ -0.02
RAB5BP61020 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAB5BP61020 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB5BP61020 AL162741.1-201ENST00000565563 1558 ntBASIC14.9□□□□□ -0.02
RAB5BP61020 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB5BP61020 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
RAB5BP61020 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms